Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Gm13401-201ENSMUST00000117074 291 ntBASIC22.13■■□□□ 1.13
Ubr3Q5U430 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.13■■□□□ 1.13
Ubr3Q5U430 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Gm7638-201ENSMUST00000121348 967 ntBASIC22.13■■□□□ 1.13
Ubr3Q5U430 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.13■■□□□ 1.13
Ubr3Q5U430 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.13■■□□□ 1.13
Ubr3Q5U430 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr3Q5U430 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ubr3Q5U430 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Ubr3Q5U430 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Gm13474-201ENSMUST00000122466 815 ntBASIC22.11■■□□□ 1.13
Ubr3Q5U430 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Gm27357-201ENSMUST00000183754 135 ntBASIC22.11■■□□□ 1.13
Ubr3Q5U430 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr3Q5U430 Spsb2-203ENSMUST00000112473 1322 ntBASIC22.1■■□□□ 1.13
Ubr3Q5U430 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ubr3Q5U430 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr3Q5U430 Gm21559-201ENSMUST00000220638 855 ntBASIC22.1■■□□□ 1.13
Ubr3Q5U430 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr3Q5U430 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr3Q5U430 Gm8587-201ENSMUST00000076538 843 ntBASIC22.1■■□□□ 1.13
Ubr3Q5U430 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.1■■□□□ 1.13
Ubr3Q5U430 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr3Q5U430 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ubr3Q5U430 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC22.09■■□□□ 1.13
Ubr3Q5U430 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.09■■□□□ 1.13
Ubr3Q5U430 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ubr3Q5U430 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr3Q5U430 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr3Q5U430 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr3Q5U430 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.08■■□□□ 1.13
Ubr3Q5U430 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC22.08■■□□□ 1.13
Ubr3Q5U430 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.08■■□□□ 1.13
Ubr3Q5U430 Gm44771-201ENSMUST00000206975 626 ntBASIC22.08■■□□□ 1.13
Ubr3Q5U430 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Ubr3Q5U430 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr3Q5U430 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ubr3Q5U430 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Ubr3Q5U430 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Gm24841-201ENSMUST00000158676 357 ntBASIC22.07■■□□□ 1.12
Ubr3Q5U430 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr3Q5U430 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ubr3Q5U430 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr3Q5U430 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Gm9731-201ENSMUST00000209480 747 ntBASIC22.05■■□□□ 1.12
Ubr3Q5U430 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubr3Q5U430 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms