Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav2Q5R1I9 Rarb-207ENSMUST00000225921 2756 ntBASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav2Q5R1I9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav2Q5R1I9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gm6576-201ENSMUST00000169678 883 ntBASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav2Q5R1I9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Gm38285-201ENSMUST00000192928 922 ntBASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Gm10138-203ENSMUST00000206952 366 ntBASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav2Q5R1I9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms