Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-4Q5R1H9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-4Q5R1H9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-4Q5R1H9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav7d-4Q5R1H9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-4Q5R1H9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-4Q5R1H9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav7d-4Q5R1H9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav7d-4Q5R1H9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7d-4Q5R1H9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms