Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Gm43060-201ENSMUST00000200621 289 ntBASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clhc1Q5M6W3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Clhc1Q5M6W3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clhc1Q5M6W3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clhc1Q5M6W3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clhc1Q5M6W3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Clhc1Q5M6W3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clhc1Q5M6W3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clhc1Q5M6W3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms