Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Vps13aQ5H8C4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vps13aQ5H8C4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vps13aQ5H8C4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.01■□□□□ 0.47
Vps13aQ5H8C4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18■□□□□ 0.47
Vps13aQ5H8C4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vps13aQ5H8C4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Gm9013-201ENSMUST00000132939 882 ntBASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vps13aQ5H8C4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vps13aQ5H8C4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Gm18958-201ENSMUST00000174258 762 ntBASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Gm37935-201ENSMUST00000192012 982 ntBASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Birc2-201ENSMUST00000054878 378 ntBASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vps13aQ5H8C4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Gm27357-201ENSMUST00000183754 135 ntBASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Gm27459-201ENSMUST00000184860 107 ntBASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vps13aQ5H8C4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Vps13aQ5H8C4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Mir3081-201ENSMUST00000175305 84 ntBASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps13aQ5H8C4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Gm27742-201ENSMUST00000184667 60 ntBASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vps13aQ5H8C4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps13aQ5H8C4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps13aQ5H8C4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms