Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp13Q5BKP2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp13Q5BKP2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Gm10812-201ENSMUST00000099864 546 ntBASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Usp13Q5BKP2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp13Q5BKP2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp13Q5BKP2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Trmt13-210ENSMUST00000198454 880 ntBASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp13Q5BKP2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.28■□□□□ 0.84
Usp13Q5BKP2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp13Q5BKP2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp13Q5BKP2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms