Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mir7071-201ENSMUST00000184847 69 ntBASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rc3h1Q4VGL6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Rc3h1Q4VGL6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Rc3h1Q4VGL6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rc3h1Q4VGL6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rc3h1Q4VGL6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rc3h1Q4VGL6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.89■□□□□ 0.93
Rc3h1Q4VGL6 Gm37055-201ENSMUST00000191866 133 ntBASIC20.89■□□□□ 0.93
Rc3h1Q4VGL6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.89■□□□□ 0.93
Rc3h1Q4VGL6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Mir2861-201ENSMUST00000175539 82 ntBASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Mir6349-201ENSMUST00000184059 97 ntBASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rc3h1Q4VGL6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Mir5122-201ENSMUST00000175004 89 ntBASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rc3h1Q4VGL6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rc3h1Q4VGL6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Gm15565-201ENSMUST00000118890 427 ntBASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rc3h1Q4VGL6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.84■□□□□ 0.93
Rc3h1Q4VGL6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms