Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm18733-201ENSMUST00000173950 856 ntBASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Pds5bQ4VA53 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Pds5bQ4VA53 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pds5bQ4VA53 Mir770-201ENSMUST00000103252 94 ntBASIC31.75■■■□□ 2.67
Pds5bQ4VA53 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC31.75■■■□□ 2.67
Pds5bQ4VA53 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Pds5bQ4VA53 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Pds5bQ4VA53 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
Pds5bQ4VA53 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Pds5bQ4VA53 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Gm6623-201ENSMUST00000173570 544 ntBASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Gm9731-201ENSMUST00000209480 747 ntBASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Gm45328-201ENSMUST00000210942 917 ntBASIC31.73■■■□□ 2.67
Pds5bQ4VA53 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Gm26039-201ENSMUST00000158152 144 ntBASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pds5bQ4VA53 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Pds5bQ4VA53 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Gm37722-201ENSMUST00000193757 208 ntBASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Pds5bQ4VA53 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Pds5bQ4VA53 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Pds5bQ4VA53 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Gm3272-201ENSMUST00000181181 1229 ntBASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Gm10566-201ENSMUST00000086739 996 ntBASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Dmtn-209ENSMUST00000228295 2572 ntBASIC31.68■■■□□ 2.66
Pds5bQ4VA53 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Ighv6-1-201ENSMUST00000193612 343 ntBASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
Pds5bQ4VA53 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pds5bQ4VA53 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pds5bQ4VA53 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
Pds5bQ4VA53 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pds5bQ4VA53 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
Pds5bQ4VA53 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Gm18206-201ENSMUST00000207027 926 ntBASIC31.65■■■□□ 2.66
Pds5bQ4VA53 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Pds5bQ4VA53 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC31.64■■■□□ 2.66
Pds5bQ4VA53 Gm43347-201ENSMUST00000200226 580 ntBASIC31.64■■■□□ 2.66
Pds5bQ4VA53 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC31.64■■■□□ 2.66
Pds5bQ4VA53 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pds5bQ4VA53 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pds5bQ4VA53 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC31.63■■■□□ 2.65
Pds5bQ4VA53 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pds5bQ4VA53 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pds5bQ4VA53 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Pds5bQ4VA53 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC31.62■■■□□ 2.65
Pds5bQ4VA53 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Pds5bQ4VA53 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Pds5bQ4VA53 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms