Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf38aQ4FK66 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Mir2861-201ENSMUST00000175539 82 ntBASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf38aQ4FK66 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38aQ4FK66 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.08■□□□□ 0.96
Prpf38aQ4FK66 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38aQ4FK66 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf38aQ4FK66 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.07■□□□□ 0.96
Prpf38aQ4FK66 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf38aQ4FK66 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Golph3-205ENSMUST00000228671 2842 ntBASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Gm12382-201ENSMUST00000122005 922 ntBASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf38aQ4FK66 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Prpf38aQ4FK66 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Gm15565-201ENSMUST00000118890 427 ntBASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Prpf38aQ4FK66 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prpf38aQ4FK66 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms