Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem40Q4FJU9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem40Q4FJU9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Tmem40Q4FJU9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Gm11643-201ENSMUST00000119578 864 ntBASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem40Q4FJU9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tmem40Q4FJU9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tmem40Q4FJU9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tmem40Q4FJU9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Gm9987-201ENSMUST00000069768 567 ntBASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tmem40Q4FJU9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tmem40Q4FJU9 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms