Protein–RNA interactions for Protein: Q3V0X2

Cldn34b4, 4930428D18Rik protein, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b4Q3V0X2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn34b4Q3V0X2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn34b4Q3V0X2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn34b4Q3V0X2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn34b4Q3V0X2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn34b4Q3V0X2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cldn34b4Q3V0X2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn34b4Q3V0X2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms