Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Ttc9Q3V038 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc9Q3V038 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ttc9Q3V038 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.3■□□□□ 0.68
Ttc9Q3V038 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Gm15378-201ENSMUST00000121894 207 ntBASIC19.3■□□□□ 0.68
Ttc9Q3V038 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.3■□□□□ 0.68
Ttc9Q3V038 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ttc9Q3V038 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ttc9Q3V038 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc9Q3V038 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.27■□□□□ 0.68
Ttc9Q3V038 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc9Q3V038 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.26■□□□□ 0.67
Ttc9Q3V038 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.26■□□□□ 0.67
Ttc9Q3V038 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc9Q3V038 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.25■□□□□ 0.67
Ttc9Q3V038 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Gm7367-201ENSMUST00000057611 492 ntBASIC19.25■□□□□ 0.67
Ttc9Q3V038 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc9Q3V038 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc9Q3V038 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ttc9Q3V038 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc9Q3V038 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc9Q3V038 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms