Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Gm43137-201ENSMUST00000198052 594 ntBASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim40Q3UWA4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim40Q3UWA4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trim40Q3UWA4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim40Q3UWA4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim40Q3UWA4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim40Q3UWA4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim40Q3UWA4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.92■□□□□ 0.3
Trim40Q3UWA4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim40Q3UWA4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim40Q3UWA4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms