Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28047Q3US59 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28047Q3US59 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28047Q3US59 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.55■□□□□ 0.88
Gm28047Q3US59 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm28047Q3US59 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28047Q3US59 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm7290-201ENSMUST00000104990 617 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm12918-201ENSMUST00000120234 636 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm15710-201ENSMUST00000121821 636 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm5075-201ENSMUST00000196916 622 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm42569-201ENSMUST00000200539 472 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.54■□□□□ 0.88
Gm28047Q3US59 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28047Q3US59 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.53■□□□□ 0.88
Gm28047Q3US59 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Gm8495-201ENSMUST00000188740 694 ntBASIC20.53■□□□□ 0.88
Gm28047Q3US59 Gm7291-201ENSMUST00000199147 382 ntBASIC20.53■□□□□ 0.88
Gm28047Q3US59 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gm28047Q3US59 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28047Q3US59 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28047Q3US59 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28047Q3US59 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28047Q3US59 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.52■□□□□ 0.87
Gm28047Q3US59 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Gm28047Q3US59 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.51■□□□□ 0.87
Gm28047Q3US59 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.51■□□□□ 0.87
Gm28047Q3US59 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm28047Q3US59 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28047Q3US59 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.5■□□□□ 0.87
Gm28047Q3US59 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Gm6211-202ENSMUST00000167849 925 ntBASIC20.5■□□□□ 0.87
Gm28047Q3US59 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.5■□□□□ 0.87
Gm28047Q3US59 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28047Q3US59 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.49■□□□□ 0.87
Gm28047Q3US59 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28047Q3US59 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms