Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
Arhgef40Q3UPH7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Arhgef40Q3UPH7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Arhgef40Q3UPH7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Gm27463-201ENSMUST00000183569 57 ntBASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef40Q3UPH7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Arhgef40Q3UPH7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Arhgef40Q3UPH7 Gm42922-201ENSMUST00000195887 2078 ntBASIC26.74■■□□□ 1.87
Arhgef40Q3UPH7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC26.74■■□□□ 1.87
Arhgef40Q3UPH7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Arhgef40Q3UPH7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Arhgef40Q3UPH7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Gm9103-201ENSMUST00000119371 405 ntBASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Gm4974-201ENSMUST00000209974 875 ntBASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef40Q3UPH7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Arhgef40Q3UPH7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Arhgef40Q3UPH7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Arhgef40Q3UPH7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Arhgef40Q3UPH7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Arhgef40Q3UPH7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Arhgef40Q3UPH7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Arhgef40Q3UPH7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
Arhgef40Q3UPH7 Tgds-204ENSMUST00000228543 1594 ntBASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Ank2-226ENSMUST00000189368 339 ntBASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 AC134329.2-201ENSMUST00000217897 428 ntBASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Gm5784-201ENSMUST00000179344 2478 ntBASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Arhgef40Q3UPH7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Arhgef40Q3UPH7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Arhgef40Q3UPH7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms