Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cks1brtQ3UNC9 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cks1brtQ3UNC9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cks1brtQ3UNC9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Cks1brtQ3UNC9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cks1brtQ3UNC9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.08□□□□□ -0.31
Cks1brtQ3UNC9 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cks1brtQ3UNC9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cks1brtQ3UNC9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cks1brtQ3UNC9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms