Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp30Q3UN04 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.15■□□□□ 0.5
Usp30Q3UN04 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Usp30Q3UN04 Odf3b-204ENSMUST00000227834 930 ntBASIC18.15■□□□□ 0.5
Usp30Q3UN04 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp30Q3UN04 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp30Q3UN04 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.15■□□□□ 0.5
Usp30Q3UN04 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Usp30Q3UN04 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.14■□□□□ 0.49
Usp30Q3UN04 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp30Q3UN04 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.13■□□□□ 0.49
Usp30Q3UN04 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp30Q3UN04 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Gm6433-201ENSMUST00000118634 875 ntBASIC18.12■□□□□ 0.49
Usp30Q3UN04 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.12■□□□□ 0.49
Usp30Q3UN04 Timm23-208ENSMUST00000226683 750 ntBASIC18.12■□□□□ 0.49
Usp30Q3UN04 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp30Q3UN04 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Mir2861-201ENSMUST00000175539 82 ntBASIC18.11■□□□□ 0.49
Usp30Q3UN04 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.11■□□□□ 0.49
Usp30Q3UN04 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp30Q3UN04 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.1■□□□□ 0.49
Usp30Q3UN04 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp30Q3UN04 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms