Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Gm26308-201ENSMUST00000157768 69 ntBASIC16.25■□□□□ 0.19
Chd8Q09XV5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Chd8Q09XV5 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.24■□□□□ 0.19
Chd8Q09XV5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd8Q09XV5 Gm10060-201ENSMUST00000212002 111 ntBASIC16.24■□□□□ 0.19
Chd8Q09XV5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd8Q09XV5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd8Q09XV5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chd8Q09XV5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.24■□□□□ 0.19
Chd8Q09XV5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chd8Q09XV5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.24■□□□□ 0.19
Chd8Q09XV5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Gm15653-201ENSMUST00000119247 907 ntBASIC16.23■□□□□ 0.19
Chd8Q09XV5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Mir5131-201ENSMUST00000175426 93 ntBASIC16.23■□□□□ 0.19
Chd8Q09XV5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd8Q09XV5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.22■□□□□ 0.19
Chd8Q09XV5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.22■□□□□ 0.19
Chd8Q09XV5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd8Q09XV5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd8Q09XV5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.21■□□□□ 0.19
Chd8Q09XV5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd8Q09XV5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.21■□□□□ 0.19
Chd8Q09XV5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.21■□□□□ 0.19
Chd8Q09XV5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd8Q09XV5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chd8Q09XV5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd8Q09XV5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.21■□□□□ 0.18
Chd8Q09XV5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd8Q09XV5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd8Q09XV5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chd8Q09XV5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Mir5126-201ENSMUST00000175513 77 ntBASIC16.2■□□□□ 0.18
Chd8Q09XV5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.2■□□□□ 0.18
Chd8Q09XV5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd8Q09XV5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd8Q09XV5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.19■□□□□ 0.18
Chd8Q09XV5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Chd8Q09XV5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms