Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hspg2Q05793 Gm7153-201ENSMUST00000117092 455 ntBASIC13.4□□□□□ -0.26
Hspg2Q05793 AW822252-206ENSMUST00000208904 237 ntBASIC13.4□□□□□ -0.26
Hspg2Q05793 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.4□□□□□ -0.26
Hspg2Q05793 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Hspg2Q05793 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.4□□□□□ -0.26
Hspg2Q05793 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hspg2Q05793 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Hspg2Q05793 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.39□□□□□ -0.27
Hspg2Q05793 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hspg2Q05793 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.38□□□□□ -0.27
Hspg2Q05793 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hspg2Q05793 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.38□□□□□ -0.27
Hspg2Q05793 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Zfp783-201ENSMUST00000095946 670 ntBASIC13.37□□□□□ -0.27
Hspg2Q05793 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.37□□□□□ -0.27
Hspg2Q05793 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hspg2Q05793 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hspg2Q05793 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.37□□□□□ -0.27
Hspg2Q05793 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hspg2Q05793 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Hspg2Q05793 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Hspg2Q05793 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hspg2Q05793 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms