Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GabpaQ00422 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.56■□□□□ 0.88
GabpaQ00422 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.56■□□□□ 0.88
GabpaQ00422 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.56■□□□□ 0.88
GabpaQ00422 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.56■□□□□ 0.88
GabpaQ00422 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.56■□□□□ 0.88
GabpaQ00422 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GabpaQ00422 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
GabpaQ00422 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GabpaQ00422 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GabpaQ00422 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
GabpaQ00422 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.54■□□□□ 0.88
GabpaQ00422 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.54■□□□□ 0.88
GabpaQ00422 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.54■□□□□ 0.88
GabpaQ00422 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GabpaQ00422 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GabpaQ00422 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GabpaQ00422 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GabpaQ00422 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GabpaQ00422 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Gm11643-201ENSMUST00000119578 864 ntBASIC20.53■□□□□ 0.88
GabpaQ00422 Gm12382-201ENSMUST00000122005 922 ntBASIC20.53■□□□□ 0.88
GabpaQ00422 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.53■□□□□ 0.88
GabpaQ00422 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GabpaQ00422 Gm43799-201ENSMUST00000201845 579 ntBASIC20.53■□□□□ 0.88
GabpaQ00422 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.53■□□□□ 0.88
GabpaQ00422 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Odf3b-204ENSMUST00000227834 930 ntBASIC20.53■□□□□ 0.88
GabpaQ00422 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GabpaQ00422 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.53■□□□□ 0.88
GabpaQ00422 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GabpaQ00422 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GabpaQ00422 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GabpaQ00422 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.52■□□□□ 0.88
GabpaQ00422 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GabpaQ00422 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.52■□□□□ 0.88
GabpaQ00422 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GabpaQ00422 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GabpaQ00422 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GabpaQ00422 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GabpaQ00422 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GabpaQ00422 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.51■□□□□ 0.87
GabpaQ00422 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.51■□□□□ 0.87
GabpaQ00422 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 Gm9987-201ENSMUST00000069768 567 ntBASIC20.51■□□□□ 0.87
GabpaQ00422 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.51■□□□□ 0.87
GabpaQ00422 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GabpaQ00422 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GabpaQ00422 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.5■□□□□ 0.87
GabpaQ00422 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Gm3375-201ENSMUST00000203929 796 ntBASIC20.5■□□□□ 0.87
GabpaQ00422 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.5■□□□□ 0.87
GabpaQ00422 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.5■□□□□ 0.87
GabpaQ00422 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
GabpaQ00422 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.5■□□□□ 0.87
GabpaQ00422 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GabpaQ00422 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GabpaQ00422 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GabpaQ00422 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GabpaQ00422 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.49■□□□□ 0.87
GabpaQ00422 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms