Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.79■□□□□ 0.6
IhhP97812 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.79■□□□□ 0.6
IhhP97812 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IhhP97812 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IhhP97812 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
IhhP97812 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IhhP97812 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IhhP97812 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
IhhP97812 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Gm10252-201ENSMUST00000209541 832 ntBASIC18.78■□□□□ 0.6
IhhP97812 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.78■□□□□ 0.6
IhhP97812 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IhhP97812 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IhhP97812 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IhhP97812 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.6
IhhP97812 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
IhhP97812 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.77■□□□□ 0.6
IhhP97812 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.77■□□□□ 0.6
IhhP97812 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IhhP97812 Gm37292-201ENSMUST00000192062 758 ntBASIC18.77■□□□□ 0.6
IhhP97812 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.77■□□□□ 0.6
IhhP97812 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IhhP97812 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IhhP97812 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IhhP97812 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.77■□□□□ 0.6
IhhP97812 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.77■□□□□ 0.59
IhhP97812 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IhhP97812 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
IhhP97812 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 Gm43183-201ENSMUST00000200632 547 ntBASIC18.76■□□□□ 0.59
IhhP97812 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IhhP97812 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.75■□□□□ 0.59
IhhP97812 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Mir6349-201ENSMUST00000184059 97 ntBASIC18.75■□□□□ 0.59
IhhP97812 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.75■□□□□ 0.59
IhhP97812 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IhhP97812 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
IhhP97812 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.74■□□□□ 0.59
IhhP97812 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.74■□□□□ 0.59
IhhP97812 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IhhP97812 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
IhhP97812 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IhhP97812 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.73■□□□□ 0.59
IhhP97812 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
IhhP97812 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.73■□□□□ 0.59
IhhP97812 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.73■□□□□ 0.59
IhhP97812 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IhhP97812 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
IhhP97812 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.73■□□□□ 0.59
IhhP97812 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IhhP97812 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IhhP97812 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IhhP97812 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IhhP97812 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms