Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.04■□□□□ 0.32
Nkx3-2P97503 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Gm2399-201ENSMUST00000104944 225 ntBASIC17.04■□□□□ 0.32
Nkx3-2P97503 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.04■□□□□ 0.32
Nkx3-2P97503 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx3-2P97503 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx3-2P97503 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.02■□□□□ 0.32
Nkx3-2P97503 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx3-2P97503 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nkx3-2P97503 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nkx3-2P97503 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx3-2P97503 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Flg-201ENSMUST00000050758 1488 ntBASIC17.01■□□□□ 0.31
Nkx3-2P97503 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.01■□□□□ 0.31
Nkx3-2P97503 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx3-2P97503 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17■□□□□ 0.31
Nkx3-2P97503 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Gm45141-201ENSMUST00000206502 1888 ntBASIC17■□□□□ 0.31
Nkx3-2P97503 Gm10252-201ENSMUST00000209541 832 ntBASIC17■□□□□ 0.31
Nkx3-2P97503 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx3-2P97503 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx3-2P97503 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx3-2P97503 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx3-2P97503 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx3-2P97503 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx3-2P97503 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.99■□□□□ 0.31
Nkx3-2P97503 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Gm13158-201ENSMUST00000122007 736 ntBASIC16.98■□□□□ 0.31
Nkx3-2P97503 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms