Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
SgcbP82349 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.14■□□□□ 0.17
SgcbP82349 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.14■□□□□ 0.17
SgcbP82349 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcbP82349 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SgcbP82349 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SgcbP82349 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.13■□□□□ 0.17
SgcbP82349 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SgcbP82349 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.13■□□□□ 0.17
SgcbP82349 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcbP82349 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.13■□□□□ 0.17
SgcbP82349 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SgcbP82349 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.12■□□□□ 0.17
SgcbP82349 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SgcbP82349 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.12■□□□□ 0.17
SgcbP82349 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.12■□□□□ 0.17
SgcbP82349 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.12■□□□□ 0.17
SgcbP82349 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SgcbP82349 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcbP82349 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SgcbP82349 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SgcbP82349 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Flg-201ENSMUST00000050758 1488 ntBASIC16.11■□□□□ 0.17
SgcbP82349 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SgcbP82349 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SgcbP82349 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Gm20760-201ENSMUST00000179197 648 ntBASIC16.11■□□□□ 0.17
SgcbP82349 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SgcbP82349 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SgcbP82349 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.11■□□□□ 0.17
SgcbP82349 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcbP82349 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.11■□□□□ 0.17
SgcbP82349 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.11■□□□□ 0.17
SgcbP82349 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SgcbP82349 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Gm12527-201ENSMUST00000117967 564 ntBASIC16.1■□□□□ 0.17
SgcbP82349 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Gm27011-201ENSMUST00000182352 972 ntBASIC16.1■□□□□ 0.17
SgcbP82349 Trmt13-210ENSMUST00000198454 880 ntBASIC16.1■□□□□ 0.17
SgcbP82349 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.1■□□□□ 0.17
SgcbP82349 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.1■□□□□ 0.17
SgcbP82349 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.1■□□□□ 0.17
SgcbP82349 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SgcbP82349 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SgcbP82349 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.1■□□□□ 0.17
SgcbP82349 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.1■□□□□ 0.17
SgcbP82349 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcbP82349 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SgcbP82349 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms