Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.89■□□□□ 0.45
Shox2P70390 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shox2P70390 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Shox2P70390 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.88■□□□□ 0.45
Shox2P70390 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Shox2P70390 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Idnk-204ENSMUST00000226010 1898 ntBASIC17.88■□□□□ 0.45
Shox2P70390 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shox2P70390 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shox2P70390 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shox2P70390 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.87■□□□□ 0.45
Shox2P70390 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Shox2P70390 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shox2P70390 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.87■□□□□ 0.45
Shox2P70390 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Shox2P70390 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.87■□□□□ 0.45
Shox2P70390 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Shox2P70390 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Shox2P70390 Gm13216-201ENSMUST00000117145 591 ntBASIC17.86■□□□□ 0.45
Shox2P70390 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.86■□□□□ 0.45
Shox2P70390 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shox2P70390 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.86■□□□□ 0.45
Shox2P70390 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.85■□□□□ 0.45
Shox2P70390 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.85■□□□□ 0.45
Shox2P70390 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Gm7417-201ENSMUST00000192950 473 ntBASIC17.85■□□□□ 0.45
Shox2P70390 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.85■□□□□ 0.45
Shox2P70390 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shox2P70390 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.84■□□□□ 0.45
Shox2P70390 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.84■□□□□ 0.45
Shox2P70390 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.84■□□□□ 0.45
Shox2P70390 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.84■□□□□ 0.45
Shox2P70390 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Shox2P70390 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Shox2P70390 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.84■□□□□ 0.45
Shox2P70390 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.84■□□□□ 0.45
Shox2P70390 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shox2P70390 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shox2P70390 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Shox2P70390 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.83■□□□□ 0.44
Shox2P70390 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
Shox2P70390 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shox2P70390 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.82■□□□□ 0.44
Shox2P70390 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Shox2P70390 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shox2P70390 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.82■□□□□ 0.44
Shox2P70390 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.82■□□□□ 0.44
Shox2P70390 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shox2P70390 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shox2P70390 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms