Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.89■□□□□ 0.61
Casp4P70343 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Casp4P70343 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Casp4P70343 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Casp4P70343 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Casp4P70343 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Casp4P70343 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Casp4P70343 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Casp4P70343 Gm13148-201ENSMUST00000118892 745 ntBASIC18.88■□□□□ 0.61
Casp4P70343 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.88■□□□□ 0.61
Casp4P70343 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Casp4P70343 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.88■□□□□ 0.61
Casp4P70343 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Casp4P70343 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Casp4P70343 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.87■□□□□ 0.61
Casp4P70343 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.87■□□□□ 0.61
Casp4P70343 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Casp4P70343 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Casp4P70343 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Casp4P70343 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Gm7290-201ENSMUST00000104990 617 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Casp4P70343 Gm12918-201ENSMUST00000120234 636 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Gm15710-201ENSMUST00000121821 636 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Gm5075-201ENSMUST00000196916 622 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Casp4P70343 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.86■□□□□ 0.61
Casp4P70343 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Casp4P70343 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Casp4P70343 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Casp4P70343 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.85■□□□□ 0.61
Casp4P70343 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Casp4P70343 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Casp4P70343 Gm6211-202ENSMUST00000167849 925 ntBASIC18.85■□□□□ 0.61
Casp4P70343 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.85■□□□□ 0.61
Casp4P70343 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.85■□□□□ 0.61
Casp4P70343 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Casp4P70343 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Casp4P70343 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Casp4P70343 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Casp4P70343 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Casp4P70343 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Casp4P70343 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.84■□□□□ 0.61
Casp4P70343 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms