Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six5P70178 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Six5P70178 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.92■□□□□ 0.3
Six5P70178 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six5P70178 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six5P70178 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Six5P70178 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.91■□□□□ 0.3
Six5P70178 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Six5P70178 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Gm2399-201ENSMUST00000104944 225 ntBASIC16.91■□□□□ 0.3
Six5P70178 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Six5P70178 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.91■□□□□ 0.3
Six5P70178 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six5P70178 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.91■□□□□ 0.3
Six5P70178 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.9■□□□□ 0.3
Six5P70178 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Six5P70178 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.9■□□□□ 0.3
Six5P70178 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six5P70178 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six5P70178 Tgds-204ENSMUST00000228543 1594 ntBASIC16.89■□□□□ 0.3
Six5P70178 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six5P70178 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six5P70178 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Six5P70178 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Six5P70178 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.89■□□□□ 0.29
Six5P70178 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six5P70178 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.88■□□□□ 0.29
Six5P70178 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.88■□□□□ 0.29
Six5P70178 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.88■□□□□ 0.29
Six5P70178 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Six5P70178 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.88■□□□□ 0.29
Six5P70178 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Six5P70178 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.88■□□□□ 0.29
Six5P70178 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Gm4968-201ENSMUST00000071458 858 ntBASIC16.88■□□□□ 0.29
Six5P70178 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six5P70178 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Six5P70178 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Six5P70178 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six5P70178 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
Six5P70178 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.86■□□□□ 0.29
Six5P70178 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Six5P70178 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Six5P70178 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.86■□□□□ 0.29
Six5P70178 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Six5P70178 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Six5P70178 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms