Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ybx1P62960 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ybx1P62960 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.55■□□□□ 0.56
Ybx1P62960 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ybx1P62960 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ybx1P62960 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ybx1P62960 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.54■□□□□ 0.56
Ybx1P62960 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.54■□□□□ 0.56
Ybx1P62960 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ybx1P62960 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.54■□□□□ 0.56
Ybx1P62960 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ybx1P62960 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ybx1P62960 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ybx1P62960 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ybx1P62960 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.54■□□□□ 0.56
Ybx1P62960 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ybx1P62960 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ybx1P62960 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.53■□□□□ 0.56
Ybx1P62960 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Gm3375-201ENSMUST00000203929 796 ntBASIC18.53■□□□□ 0.56
Ybx1P62960 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.53■□□□□ 0.56
Ybx1P62960 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ybx1P62960 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ybx1P62960 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ybx1P62960 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ybx1P62960 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.52■□□□□ 0.56
Ybx1P62960 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ybx1P62960 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ybx1P62960 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Ybx1P62960 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ybx1P62960 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Ybx1P62960 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ybx1P62960 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ybx1P62960 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Ybx1P62960 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ybx1P62960 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.51■□□□□ 0.55
Ybx1P62960 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ybx1P62960 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ybx1P62960 Gm12382-201ENSMUST00000122005 922 ntBASIC18.51■□□□□ 0.55
Ybx1P62960 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ybx1P62960 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ybx1P62960 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ybx1P62960 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ybx1P62960 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Ybx1P62960 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.5■□□□□ 0.55
Ybx1P62960 Gm7889-201ENSMUST00000185591 958 ntBASIC18.5■□□□□ 0.55
Ybx1P62960 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.5■□□□□ 0.55
Ybx1P62960 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.5■□□□□ 0.55
Ybx1P62960 Odf3b-204ENSMUST00000227834 930 ntBASIC18.5■□□□□ 0.55
Ybx1P62960 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.5■□□□□ 0.55
Ybx1P62960 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ybx1P62960 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ybx1P62960 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ybx1P62960 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ybx1P62960 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.49■□□□□ 0.55
Ybx1P62960 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Ybx1P62960 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.49■□□□□ 0.55
Ybx1P62960 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.49■□□□□ 0.55
Ybx1P62960 Timm23-208ENSMUST00000226683 750 ntBASIC18.49■□□□□ 0.55
Ybx1P62960 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ybx1P62960 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms