Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.9□□□□□ -0.34
Rpl39P62892 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.9□□□□□ -0.34
Rpl39P62892 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rpl39P62892 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rpl39P62892 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rpl39P62892 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rpl39P62892 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.89□□□□□ -0.35
Rpl39P62892 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rpl39P62892 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.89□□□□□ -0.35
Rpl39P62892 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rpl39P62892 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.89□□□□□ -0.35
Rpl39P62892 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.89□□□□□ -0.35
Rpl39P62892 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rpl39P62892 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rpl39P62892 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rpl39P62892 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.89□□□□□ -0.35
Rpl39P62892 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rpl39P62892 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rpl39P62892 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.88□□□□□ -0.35
Rpl39P62892 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rpl39P62892 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.88□□□□□ -0.35
Rpl39P62892 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rpl39P62892 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rpl39P62892 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rpl39P62892 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpl39P62892 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpl39P62892 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpl39P62892 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.87□□□□□ -0.35
Rpl39P62892 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpl39P62892 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.87□□□□□ -0.35
Rpl39P62892 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rpl39P62892 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpl39P62892 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rpl39P62892 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Gm14117-201ENSMUST00000122417 843 ntBASIC12.86□□□□□ -0.35
Rpl39P62892 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.86□□□□□ -0.35
Rpl39P62892 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rpl39P62892 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpl39P62892 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rpl39P62892 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rpl39P62892 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rpl39P62892 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms