Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lsm6P62313 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lsm6P62313 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lsm6P62313 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lsm6P62313 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lsm6P62313 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lsm6P62313 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lsm6P62313 Mir5133-201ENSMUST00000174955 77 ntBASIC15.82■□□□□ 0.12
Lsm6P62313 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lsm6P62313 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Gm12933-201ENSMUST00000120203 872 ntBASIC15.81■□□□□ 0.12
Lsm6P62313 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.81■□□□□ 0.12
Lsm6P62313 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.81■□□□□ 0.12
Lsm6P62313 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.81■□□□□ 0.12
Lsm6P62313 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Lsm6P62313 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lsm6P62313 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm6P62313 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Lsm6P62313 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lsm6P62313 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lsm6P62313 Fst-202ENSMUST00000223640 2612 ntBASIC15.8■□□□□ 0.12
Lsm6P62313 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.79■□□□□ 0.12
Lsm6P62313 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lsm6P62313 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lsm6P62313 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.79■□□□□ 0.12
Lsm6P62313 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.79■□□□□ 0.12
Lsm6P62313 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lsm6P62313 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm6P62313 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lsm6P62313 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lsm6P62313 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm6P62313 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.78■□□□□ 0.12
Lsm6P62313 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.78■□□□□ 0.12
Lsm6P62313 Gm13148-201ENSMUST00000118892 745 ntBASIC15.78■□□□□ 0.12
Lsm6P62313 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Gm37179-201ENSMUST00000194862 823 ntBASIC15.78■□□□□ 0.12
Lsm6P62313 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lsm6P62313 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lsm6P62313 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms