Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tubgcp3P58854 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.45■□□□□ 0.54
Tubgcp3P58854 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Gm22325-201ENSMUST00000158904 308 ntBASIC18.44■□□□□ 0.54
Tubgcp3P58854 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tubgcp3P58854 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Gm15039-201ENSMUST00000118914 875 ntBASIC18.43■□□□□ 0.54
Tubgcp3P58854 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.43■□□□□ 0.54
Tubgcp3P58854 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.43■□□□□ 0.54
Tubgcp3P58854 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tubgcp3P58854 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.42■□□□□ 0.54
Tubgcp3P58854 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tubgcp3P58854 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Tubgcp3P58854 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Rarb-207ENSMUST00000225921 2756 ntBASIC18.41■□□□□ 0.54
Tubgcp3P58854 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Gm27405-201ENSMUST00000184201 112 ntBASIC18.41■□□□□ 0.54
Tubgcp3P58854 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.41■□□□□ 0.54
Tubgcp3P58854 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.41■□□□□ 0.54
Tubgcp3P58854 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.41■□□□□ 0.54
Tubgcp3P58854 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tubgcp3P58854 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.4■□□□□ 0.54
Tubgcp3P58854 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.4■□□□□ 0.54
Tubgcp3P58854 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tubgcp3P58854 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tubgcp3P58854 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.39■□□□□ 0.53
Tubgcp3P58854 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tubgcp3P58854 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms