Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx4P53776 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.27■□□□□ 0.04
Lhx4P53776 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx4P53776 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.27■□□□□ 0.04
Lhx4P53776 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx4P53776 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lhx4P53776 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx4P53776 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.27■□□□□ 0.04
Lhx4P53776 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.27■□□□□ 0.04
Lhx4P53776 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.27■□□□□ 0.03
Lhx4P53776 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx4P53776 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Gm7290-201ENSMUST00000104990 617 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.26■□□□□ 0.03
Lhx4P53776 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Lhx4P53776 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Gm12918-201ENSMUST00000120234 636 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Gm15710-201ENSMUST00000121821 636 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.26■□□□□ 0.03
Lhx4P53776 Gm5075-201ENSMUST00000196916 622 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.26■□□□□ 0.03
Lhx4P53776 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.26■□□□□ 0.03
Lhx4P53776 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx4P53776 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lhx4P53776 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx4P53776 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.25■□□□□ 0.03
Lhx4P53776 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Lhx4P53776 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.25■□□□□ 0.03
Lhx4P53776 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Lhx4P53776 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.25■□□□□ 0.03
Lhx4P53776 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx4P53776 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx4P53776 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lhx4P53776 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Lhx4P53776 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Lhx4P53776 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.24■□□□□ 0.03
Lhx4P53776 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx4P53776 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lhx4P53776 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.23■□□□□ 0.03
Lhx4P53776 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lhx4P53776 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.23■□□□□ 0.03
Lhx4P53776 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.23■□□□□ 0.03
Lhx4P53776 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lhx4P53776 Gm5408-201ENSMUST00000197998 747 ntBASIC15.23■□□□□ 0.03
Lhx4P53776 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Lhx4P53776 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms