Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.67■□□□□ 0.74
SqleP52019 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SqleP52019 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
SqleP52019 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.67■□□□□ 0.74
SqleP52019 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.67■□□□□ 0.74
SqleP52019 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.66■□□□□ 0.74
SqleP52019 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SqleP52019 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
SqleP52019 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.66■□□□□ 0.74
SqleP52019 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Mir2861-201ENSMUST00000175539 82 ntBASIC19.66■□□□□ 0.74
SqleP52019 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.66■□□□□ 0.74
SqleP52019 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.66■□□□□ 0.74
SqleP52019 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SqleP52019 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SqleP52019 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SqleP52019 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SqleP52019 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.65■□□□□ 0.74
SqleP52019 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.65■□□□□ 0.74
SqleP52019 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SqleP52019 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SqleP52019 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SqleP52019 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 Gm17808-201ENSMUST00000200859 894 ntBASIC19.64■□□□□ 0.73
SqleP52019 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.64■□□□□ 0.73
SqleP52019 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.64■□□□□ 0.73
SqleP52019 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.64■□□□□ 0.73
SqleP52019 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SqleP52019 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SqleP52019 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SqleP52019 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SqleP52019 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SqleP52019 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SqleP52019 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.63■□□□□ 0.73
SqleP52019 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SqleP52019 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.63■□□□□ 0.73
SqleP52019 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SqleP52019 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SqleP52019 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SqleP52019 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
SqleP52019 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SqleP52019 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SqleP52019 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SqleP52019 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.62■□□□□ 0.73
SqleP52019 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SqleP52019 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SqleP52019 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SqleP52019 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SqleP52019 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SqleP52019 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.61■□□□□ 0.73
SqleP52019 Mir1668-201ENSMUST00000184114 107 ntBASIC19.61■□□□□ 0.73
SqleP52019 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.61■□□□□ 0.73
SqleP52019 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SqleP52019 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SqleP52019 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SqleP52019 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SqleP52019 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SqleP52019 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SqleP52019 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SqleP52019 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SqleP52019 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.6■□□□□ 0.73
SqleP52019 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SqleP52019 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SqleP52019 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Gm24589-201ENSMUST00000116692 94 ntBASIC19.59■□□□□ 0.73
SqleP52019 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.59■□□□□ 0.73
SqleP52019 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SqleP52019 Mir3081-201ENSMUST00000175305 84 ntBASIC19.59■□□□□ 0.73
SqleP52019 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SqleP52019 Gm4974-201ENSMUST00000209974 875 ntBASIC19.59■□□□□ 0.73
SqleP52019 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SqleP52019 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SqleP52019 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms