Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.06■□□□□ 0.32
RoraP51448 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.06■□□□□ 0.32
RoraP51448 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RoraP51448 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.05■□□□□ 0.32
RoraP51448 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RoraP51448 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RoraP51448 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.05■□□□□ 0.32
RoraP51448 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RoraP51448 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RoraP51448 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.05■□□□□ 0.32
RoraP51448 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.05■□□□□ 0.32
RoraP51448 Mir6982-201ENSMUST00000184354 68 ntBASIC17.05■□□□□ 0.32
RoraP51448 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.05■□□□□ 0.32
RoraP51448 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.05■□□□□ 0.32
RoraP51448 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RoraP51448 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.05■□□□□ 0.32
RoraP51448 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RoraP51448 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.05■□□□□ 0.32
RoraP51448 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RoraP51448 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.04■□□□□ 0.32
RoraP51448 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.04■□□□□ 0.32
RoraP51448 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RoraP51448 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RoraP51448 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RoraP51448 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.04■□□□□ 0.32
RoraP51448 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RoraP51448 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RoraP51448 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RoraP51448 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.03■□□□□ 0.32
RoraP51448 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RoraP51448 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.03■□□□□ 0.32
RoraP51448 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RoraP51448 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.03■□□□□ 0.32
RoraP51448 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RoraP51448 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.02■□□□□ 0.32
RoraP51448 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.02■□□□□ 0.32
RoraP51448 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.02■□□□□ 0.32
RoraP51448 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.02■□□□□ 0.32
RoraP51448 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RoraP51448 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RoraP51448 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RoraP51448 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RoraP51448 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.01■□□□□ 0.31
RoraP51448 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RoraP51448 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.01■□□□□ 0.31
RoraP51448 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RoraP51448 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RoraP51448 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RoraP51448 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms