Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LtbrP50284 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.26■□□□□ 0.99
LtbrP50284 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
LtbrP50284 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LtbrP50284 BC021767-201ENSMUST00000126387 1716 ntBASIC21.26■□□□□ 0.99
LtbrP50284 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LtbrP50284 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LtbrP50284 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Gm18959-201ENSMUST00000208954 655 ntBASIC21.25■□□□□ 0.99
LtbrP50284 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.25■□□□□ 0.99
LtbrP50284 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Gm18025-201ENSMUST00000221733 862 ntBASIC21.25■□□□□ 0.99
LtbrP50284 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LtbrP50284 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.25■□□□□ 0.99
LtbrP50284 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LtbrP50284 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LtbrP50284 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.24■□□□□ 0.99
LtbrP50284 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LtbrP50284 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LtbrP50284 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LtbrP50284 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LtbrP50284 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.23■□□□□ 0.99
LtbrP50284 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LtbrP50284 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.23■□□□□ 0.99
LtbrP50284 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.23■□□□□ 0.99
LtbrP50284 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LtbrP50284 Gm42545-201ENSMUST00000202755 922 ntBASIC21.23■□□□□ 0.99
LtbrP50284 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.23■□□□□ 0.99
LtbrP50284 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LtbrP50284 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LtbrP50284 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Gm14859-201ENSMUST00000117752 357 ntBASIC21.22■□□□□ 0.99
LtbrP50284 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.22■□□□□ 0.99
LtbrP50284 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LtbrP50284 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.21■□□□□ 0.99
LtbrP50284 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.21■□□□□ 0.99
LtbrP50284 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LtbrP50284 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.21■□□□□ 0.99
LtbrP50284 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
LtbrP50284 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
LtbrP50284 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
LtbrP50284 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.2■□□□□ 0.98
LtbrP50284 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LtbrP50284 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.2■□□□□ 0.98
LtbrP50284 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LtbrP50284 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LtbrP50284 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LtbrP50284 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LtbrP50284 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LtbrP50284 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LtbrP50284 Gm12382-201ENSMUST00000122005 922 ntBASIC21.19■□□□□ 0.98
LtbrP50284 Gm10138-203ENSMUST00000206952 366 ntBASIC21.19■□□□□ 0.98
LtbrP50284 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LtbrP50284 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LtbrP50284 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LtbrP50284 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LtbrP50284 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LtbrP50284 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LtbrP50284 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.18■□□□□ 0.98
LtbrP50284 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LtbrP50284 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.18■□□□□ 0.98
LtbrP50284 Gm37292-201ENSMUST00000192062 758 ntBASIC21.18■□□□□ 0.98
LtbrP50284 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LtbrP50284 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
LtbrP50284 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LtbrP50284 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LtbrP50284 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LtbrP50284 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms