Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GdnfP48540 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GdnfP48540 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
GdnfP48540 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GdnfP48540 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.8■□□□□ 0.12
GdnfP48540 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.8■□□□□ 0.12
GdnfP48540 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.8■□□□□ 0.12
GdnfP48540 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GdnfP48540 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.8■□□□□ 0.12
GdnfP48540 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GdnfP48540 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.79■□□□□ 0.12
GdnfP48540 Gm7860-201ENSMUST00000121190 879 ntBASIC15.79■□□□□ 0.12
GdnfP48540 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GdnfP48540 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GdnfP48540 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.78■□□□□ 0.12
GdnfP48540 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Gm38205-201ENSMUST00000192243 258 ntBASIC15.78■□□□□ 0.12
GdnfP48540 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Gm9988-201ENSMUST00000069786 435 ntBASIC15.78■□□□□ 0.12
GdnfP48540 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.78■□□□□ 0.12
GdnfP48540 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GdnfP48540 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
GdnfP48540 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.77■□□□□ 0.12
GdnfP48540 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
GdnfP48540 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.77■□□□□ 0.12
GdnfP48540 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
GdnfP48540 Gm15039-201ENSMUST00000118914 875 ntBASIC15.77■□□□□ 0.12
GdnfP48540 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.77■□□□□ 0.12
GdnfP48540 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.77■□□□□ 0.12
GdnfP48540 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GdnfP48540 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
GdnfP48540 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
GdnfP48540 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GdnfP48540 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
GdnfP48540 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GdnfP48540 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GdnfP48540 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.77■□□□□ 0.11
GdnfP48540 Reep4-203ENSMUST00000226563 1444 ntBASIC15.77■□□□□ 0.11
GdnfP48540 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GdnfP48540 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GdnfP48540 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
GdnfP48540 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.76■□□□□ 0.11
GdnfP48540 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms