Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rfx3P48381 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.34■□□□□ 0.21
Rfx3P48381 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.34■□□□□ 0.21
Rfx3P48381 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.34■□□□□ 0.21
Rfx3P48381 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
Rfx3P48381 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfx3P48381 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx3P48381 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx3P48381 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx3P48381 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx3P48381 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfx3P48381 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx3P48381 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx3P48381 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx3P48381 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx3P48381 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx3P48381 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.33■□□□□ 0.2
Rfx3P48381 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.33■□□□□ 0.2
Rfx3P48381 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.33■□□□□ 0.2
Rfx3P48381 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Rfx3P48381 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfx3P48381 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx3P48381 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Rfx3P48381 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rfx3P48381 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Rfx3P48381 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx3P48381 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rfx3P48381 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rfx3P48381 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx3P48381 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Gm13534-201ENSMUST00000121169 513 ntBASIC16.31■□□□□ 0.2
Rfx3P48381 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rfx3P48381 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfx3P48381 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx3P48381 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rfx3P48381 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.3■□□□□ 0.2
Rfx3P48381 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx3P48381 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx3P48381 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfx3P48381 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx3P48381 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx3P48381 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx3P48381 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx3P48381 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx3P48381 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx3P48381 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx3P48381 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx3P48381 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfx3P48381 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.28■□□□□ 0.2
Rfx3P48381 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx3P48381 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms