Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx2P48379 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rfx2P48379 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rfx2P48379 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfx2P48379 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfx2P48379 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rfx2P48379 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfx2P48379 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx2P48379 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.9■□□□□ 0.62
Rfx2P48379 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rfx2P48379 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.9■□□□□ 0.62
Rfx2P48379 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx2P48379 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rfx2P48379 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfx2P48379 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rfx2P48379 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Gm11249-201ENSMUST00000117071 859 ntBASIC18.89■□□□□ 0.61
Rfx2P48379 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.89■□□□□ 0.61
Rfx2P48379 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.89■□□□□ 0.61
Rfx2P48379 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.89■□□□□ 0.61
Rfx2P48379 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.89■□□□□ 0.61
Rfx2P48379 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.89■□□□□ 0.61
Rfx2P48379 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx2P48379 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfx2P48379 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx2P48379 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Gm2399-201ENSMUST00000104944 225 ntBASIC18.88■□□□□ 0.61
Rfx2P48379 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx2P48379 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfx2P48379 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx2P48379 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.87■□□□□ 0.61
Rfx2P48379 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rfx2P48379 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.87■□□□□ 0.61
Rfx2P48379 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Rfx2P48379 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfx2P48379 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx2P48379 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfx2P48379 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.86■□□□□ 0.61
Rfx2P48379 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.86■□□□□ 0.61
Rfx2P48379 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.86■□□□□ 0.61
Rfx2P48379 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx2P48379 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx2P48379 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rfx2P48379 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx2P48379 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms