Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nedd4P46935 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.82■■□□□ 1.08
Nedd4P46935 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.82■■□□□ 1.08
Nedd4P46935 Gm21559-201ENSMUST00000220638 855 ntBASIC21.82■■□□□ 1.08
Nedd4P46935 Gm8587-201ENSMUST00000076538 843 ntBASIC21.82■■□□□ 1.08
Nedd4P46935 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nedd4P46935 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nedd4P46935 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.82■■□□□ 1.08
Nedd4P46935 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nedd4P46935 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nedd4P46935 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nedd4P46935 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.81■■□□□ 1.08
Nedd4P46935 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Mir2861-201ENSMUST00000175539 82 ntBASIC21.81■■□□□ 1.08
Nedd4P46935 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nedd4P46935 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Nedd4P46935 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.8■■□□□ 1.08
Nedd4P46935 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
Nedd4P46935 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.8■■□□□ 1.08
Nedd4P46935 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nedd4P46935 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nedd4P46935 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Nedd4P46935 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.79■■□□□ 1.08
Nedd4P46935 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nedd4P46935 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Nedd4P46935 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.78■■□□□ 1.08
Nedd4P46935 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Nedd4P46935 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nedd4P46935 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Gm9013-201ENSMUST00000132939 882 ntBASIC21.77■■□□□ 1.08
Nedd4P46935 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.77■■□□□ 1.08
Nedd4P46935 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nedd4P46935 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Nedd4P46935 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Nedd4P46935 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nedd4P46935 Gm27389-201ENSMUST00000183622 195 ntBASIC21.76■■□□□ 1.07
Nedd4P46935 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.76■■□□□ 1.07
Nedd4P46935 Gm17808-201ENSMUST00000200859 894 ntBASIC21.76■■□□□ 1.07
Nedd4P46935 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.76■■□□□ 1.07
Nedd4P46935 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nedd4P46935 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nedd4P46935 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nedd4P46935 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nedd4P46935 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.75■■□□□ 1.07
Nedd4P46935 Gm18958-201ENSMUST00000174258 762 ntBASIC21.75■■□□□ 1.07
Nedd4P46935 Gm43514-201ENSMUST00000198852 424 ntBASIC21.75■■□□□ 1.07
Nedd4P46935 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nedd4P46935 Mzt1-203ENSMUST00000227948 952 ntBASIC21.75■■□□□ 1.07
Nedd4P46935 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nedd4P46935 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nedd4P46935 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nedd4P46935 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nedd4P46935 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nedd4P46935 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nedd4P46935 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nedd4P46935 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nedd4P46935 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms