Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4bP46467 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vps4bP46467 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps4bP46467 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.33■□□□□ 0.52
Vps4bP46467 Gm37179-201ENSMUST00000194862 823 ntBASIC18.33■□□□□ 0.52
Vps4bP46467 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vps4bP46467 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.33■□□□□ 0.52
Vps4bP46467 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps4bP46467 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps4bP46467 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps4bP46467 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps4bP46467 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps4bP46467 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vps4bP46467 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps4bP46467 Gm22325-201ENSMUST00000158904 308 ntBASIC18.32■□□□□ 0.52
Vps4bP46467 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Tgds-204ENSMUST00000228543 1594 ntBASIC18.32■□□□□ 0.52
Vps4bP46467 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps4bP46467 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vps4bP46467 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.31■□□□□ 0.52
Vps4bP46467 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Vps4bP46467 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps4bP46467 Gm27011-201ENSMUST00000182352 972 ntBASIC18.31■□□□□ 0.52
Vps4bP46467 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps4bP46467 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps4bP46467 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps4bP46467 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps4bP46467 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps4bP46467 Gm18671-201ENSMUST00000214826 683 ntBASIC18.3■□□□□ 0.52
Vps4bP46467 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps4bP46467 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps4bP46467 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Fst-202ENSMUST00000223640 2612 ntBASIC18.29■□□□□ 0.52
Vps4bP46467 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vps4bP46467 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.29■□□□□ 0.52
Vps4bP46467 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Vps4bP46467 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps4bP46467 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps4bP46467 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps4bP46467 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 Gm6420-201ENSMUST00000193885 723 ntBASIC18.28■□□□□ 0.52
Vps4bP46467 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps4bP46467 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Vps4bP46467 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps4bP46467 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms