Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Grk6-206ENSMUST00000224995 2971 ntBASIC16.91■□□□□ 0.3
RetP35546 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RetP35546 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.9■□□□□ 0.3
RetP35546 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.9■□□□□ 0.3
RetP35546 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RetP35546 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.9■□□□□ 0.3
RetP35546 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.9■□□□□ 0.3
RetP35546 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
RetP35546 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RetP35546 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RetP35546 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Gm12896-201ENSMUST00000118430 226 ntBASIC16.89■□□□□ 0.29
RetP35546 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.89■□□□□ 0.29
RetP35546 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RetP35546 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RetP35546 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RetP35546 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.89■□□□□ 0.29
RetP35546 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RetP35546 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.88■□□□□ 0.29
RetP35546 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RetP35546 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.88■□□□□ 0.29
RetP35546 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.88■□□□□ 0.29
RetP35546 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RetP35546 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RetP35546 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.88■□□□□ 0.29
RetP35546 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.87■□□□□ 0.29
RetP35546 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
RetP35546 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RetP35546 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RetP35546 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.87■□□□□ 0.29
RetP35546 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RetP35546 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.87■□□□□ 0.29
RetP35546 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RetP35546 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RetP35546 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.86■□□□□ 0.29
RetP35546 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RetP35546 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.86■□□□□ 0.29
RetP35546 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RetP35546 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RetP35546 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RetP35546 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RetP35546 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RetP35546 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms