Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.13■□□□□ 0.33
Slc6a11P31650 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.13■□□□□ 0.33
Slc6a11P31650 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Slc6a11P31650 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.13■□□□□ 0.33
Slc6a11P31650 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a11P31650 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.13■□□□□ 0.33
Slc6a11P31650 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a11P31650 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a11P31650 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.12■□□□□ 0.33
Slc6a11P31650 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Slc6a11P31650 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a11P31650 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a11P31650 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.11■□□□□ 0.33
Slc6a11P31650 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.11■□□□□ 0.33
Slc6a11P31650 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.11■□□□□ 0.33
Slc6a11P31650 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Slc6a11P31650 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a11P31650 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a11P31650 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
Slc6a11P31650 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Slc6a11P31650 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc6a11P31650 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a11P31650 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Slc6a11P31650 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc6a11P31650 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.09■□□□□ 0.33
Slc6a11P31650 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Slc6a11P31650 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Gm8520-201ENSMUST00000186517 868 ntBASIC17.09■□□□□ 0.33
Slc6a11P31650 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.09■□□□□ 0.33
Slc6a11P31650 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc6a11P31650 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.09■□□□□ 0.33
Slc6a11P31650 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a11P31650 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a11P31650 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc6a11P31650 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a11P31650 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Slc6a11P31650 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.08■□□□□ 0.32
Slc6a11P31650 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a11P31650 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Slc6a11P31650 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms