Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a13P31649 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc6a13P31649 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a13P31649 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.35■□□□□ 0.53
Slc6a13P31649 Gm12896-201ENSMUST00000118430 226 ntBASIC18.35■□□□□ 0.53
Slc6a13P31649 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.35■□□□□ 0.53
Slc6a13P31649 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a13P31649 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a13P31649 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a13P31649 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a13P31649 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a13P31649 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.34■□□□□ 0.53
Slc6a13P31649 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc6a13P31649 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a13P31649 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a13P31649 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a13P31649 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a13P31649 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a13P31649 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc6a13P31649 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc6a13P31649 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a13P31649 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a13P31649 Gm12527-201ENSMUST00000117967 564 ntBASIC18.33■□□□□ 0.52
Slc6a13P31649 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.33■□□□□ 0.52
Slc6a13P31649 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a13P31649 Gm20049-201ENSMUST00000219950 730 ntBASIC18.33■□□□□ 0.52
Slc6a13P31649 Zfp783-201ENSMUST00000095946 670 ntBASIC18.33■□□□□ 0.52
Slc6a13P31649 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a13P31649 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a13P31649 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a13P31649 Dio3-201ENSMUST00000097228 1449 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Slc6a13P31649 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm11927-201ENSMUST00000118472 759 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm27275-201ENSMUST00000184318 272 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm38285-201ENSMUST00000192928 922 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm2559-201ENSMUST00000201323 363 ntBASIC18.32■□□□□ 0.52
Slc6a13P31649 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a13P31649 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a13P31649 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Mtag2-201ENSMUST00000058665 714 ntBASIC18.31■□□□□ 0.52
Slc6a13P31649 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc6a13P31649 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a13P31649 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Slc6a13P31649 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.3■□□□□ 0.52
Slc6a13P31649 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.3■□□□□ 0.52
Slc6a13P31649 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Flg-201ENSMUST00000050758 1488 ntBASIC18.3■□□□□ 0.52
Slc6a13P31649 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a13P31649 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc6a13P31649 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a13P31649 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.29■□□□□ 0.52
Slc6a13P31649 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc6a13P31649 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.29■□□□□ 0.52
Slc6a13P31649 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a13P31649 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms