Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vcam1P29533 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Vcam1P29533 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.88■□□□□ 0.93
Vcam1P29533 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Vcam1P29533 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vcam1P29533 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.87■□□□□ 0.93
Vcam1P29533 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Vcam1P29533 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vcam1P29533 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.86■□□□□ 0.93
Vcam1P29533 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Vcam1P29533 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.86■□□□□ 0.93
Vcam1P29533 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.86■□□□□ 0.93
Vcam1P29533 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.86■□□□□ 0.93
Vcam1P29533 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.86■□□□□ 0.93
Vcam1P29533 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vcam1P29533 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Vcam1P29533 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Vcam1P29533 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
Vcam1P29533 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Vcam1P29533 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Vcam1P29533 Gm10517-202ENSMUST00000192970 758 ntBASIC20.85■□□□□ 0.93
Vcam1P29533 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.85■□□□□ 0.93
Vcam1P29533 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vcam1P29533 Tgds-204ENSMUST00000228543 1594 ntBASIC20.85■□□□□ 0.93
Vcam1P29533 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
Vcam1P29533 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.84■□□□□ 0.93
Vcam1P29533 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.84■□□□□ 0.93
Vcam1P29533 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Gm7889-201ENSMUST00000185591 958 ntBASIC20.84■□□□□ 0.93
Vcam1P29533 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vcam1P29533 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Vcam1P29533 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vcam1P29533 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.83■□□□□ 0.93
Vcam1P29533 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.83■□□□□ 0.92
Vcam1P29533 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vcam1P29533 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vcam1P29533 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vcam1P29533 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.82■□□□□ 0.92
Vcam1P29533 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vcam1P29533 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vcam1P29533 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms