Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6aP27664 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.99■□□□□ 0.95
Pde6aP27664 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pde6aP27664 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.98■□□□□ 0.95
Pde6aP27664 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pde6aP27664 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pde6aP27664 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.98■□□□□ 0.95
Pde6aP27664 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6aP27664 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pde6aP27664 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.97■□□□□ 0.95
Pde6aP27664 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6aP27664 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.97■□□□□ 0.95
Pde6aP27664 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pde6aP27664 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.96■□□□□ 0.95
Pde6aP27664 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pde6aP27664 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pde6aP27664 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.95■□□□□ 0.94
Pde6aP27664 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pde6aP27664 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.95■□□□□ 0.94
Pde6aP27664 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pde6aP27664 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pde6aP27664 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.94■□□□□ 0.94
Pde6aP27664 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.94■□□□□ 0.94
Pde6aP27664 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Pde6aP27664 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.94■□□□□ 0.94
Pde6aP27664 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.94■□□□□ 0.94
Pde6aP27664 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6aP27664 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.93■□□□□ 0.94
Pde6aP27664 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Pde6aP27664 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pde6aP27664 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pde6aP27664 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.92■□□□□ 0.94
Pde6aP27664 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.92■□□□□ 0.94
Pde6aP27664 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.92■□□□□ 0.94
Pde6aP27664 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6aP27664 Grk6-206ENSMUST00000224995 2971 ntBASIC20.91■□□□□ 0.94
Pde6aP27664 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6aP27664 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6aP27664 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.91■□□□□ 0.94
Pde6aP27664 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.91■□□□□ 0.94
Pde6aP27664 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6aP27664 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pde6aP27664 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pde6aP27664 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6aP27664 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.9■□□□□ 0.94
Pde6aP27664 Gm20760-201ENSMUST00000179197 648 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms