Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cd40P27512 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.36■□□□□ 0.21
Cd40P27512 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.36■□□□□ 0.21
Cd40P27512 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.36■□□□□ 0.21
Cd40P27512 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cd40P27512 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd40P27512 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Cd40P27512 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Cd40P27512 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Cd40P27512 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.35■□□□□ 0.21
Cd40P27512 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.35■□□□□ 0.21
Cd40P27512 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Cd40P27512 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
Cd40P27512 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.35■□□□□ 0.21
Cd40P27512 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Dio3-201ENSMUST00000097228 1449 ntBASIC16.35■□□□□ 0.21
Cd40P27512 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cd40P27512 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cd40P27512 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.34■□□□□ 0.21
Cd40P27512 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.34■□□□□ 0.21
Cd40P27512 Gm29257-201ENSMUST00000186115 639 ntBASIC16.34■□□□□ 0.21
Cd40P27512 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Cd40P27512 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.34■□□□□ 0.21
Cd40P27512 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cd40P27512 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cd40P27512 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd40P27512 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cd40P27512 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cd40P27512 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Gm12896-201ENSMUST00000118430 226 ntBASIC16.33■□□□□ 0.2
Cd40P27512 Gm11927-201ENSMUST00000118472 759 ntBASIC16.33■□□□□ 0.2
Cd40P27512 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.33■□□□□ 0.2
Cd40P27512 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.33■□□□□ 0.2
Cd40P27512 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cd40P27512 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cd40P27512 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.32■□□□□ 0.2
Cd40P27512 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Gm20049-201ENSMUST00000219950 730 ntBASIC16.32■□□□□ 0.2
Cd40P27512 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cd40P27512 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cd40P27512 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.31■□□□□ 0.2
Cd40P27512 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cd40P27512 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Cd40P27512 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Cd40P27512 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd40P27512 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cd40P27512 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd40P27512 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms