Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.85■□□□□ 0.13
SnrpbP27048 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SnrpbP27048 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SnrpbP27048 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.84■□□□□ 0.13
SnrpbP27048 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.84■□□□□ 0.13
SnrpbP27048 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.84■□□□□ 0.13
SnrpbP27048 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.84■□□□□ 0.13
SnrpbP27048 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.84■□□□□ 0.13
SnrpbP27048 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SnrpbP27048 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SnrpbP27048 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SnrpbP27048 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SnrpbP27048 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SnrpbP27048 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
SnrpbP27048 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SnrpbP27048 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SnrpbP27048 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.82■□□□□ 0.12
SnrpbP27048 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
SnrpbP27048 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SnrpbP27048 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SnrpbP27048 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SnrpbP27048 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.81■□□□□ 0.12
SnrpbP27048 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SnrpbP27048 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SnrpbP27048 Gm12251-201ENSMUST00000117893 792 ntBASIC15.81■□□□□ 0.12
SnrpbP27048 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.81■□□□□ 0.12
SnrpbP27048 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.81■□□□□ 0.12
SnrpbP27048 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.81■□□□□ 0.12
SnrpbP27048 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Gm8969-201ENSMUST00000199694 526 ntBASIC15.81■□□□□ 0.12
SnrpbP27048 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.81■□□□□ 0.12
SnrpbP27048 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Tgds-204ENSMUST00000228543 1594 ntBASIC15.81■□□□□ 0.12
SnrpbP27048 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SnrpbP27048 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SnrpbP27048 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SnrpbP27048 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SnrpbP27048 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SnrpbP27048 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.8■□□□□ 0.12
SnrpbP27048 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.8■□□□□ 0.12
SnrpbP27048 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SnrpbP27048 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms