Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxd8P23463 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxd8P23463 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.73■□□□□ 0.59
Hoxd8P23463 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hoxd8P23463 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hoxd8P23463 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxd8P23463 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxd8P23463 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.72■□□□□ 0.59
Hoxd8P23463 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxd8P23463 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hoxd8P23463 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.71■□□□□ 0.59
Hoxd8P23463 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.71■□□□□ 0.59
Hoxd8P23463 Gm4974-201ENSMUST00000209974 875 ntBASIC18.71■□□□□ 0.59
Hoxd8P23463 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.71■□□□□ 0.59
Hoxd8P23463 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.71■□□□□ 0.59
Hoxd8P23463 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.71■□□□□ 0.59
Hoxd8P23463 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxd8P23463 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.7■□□□□ 0.58
Hoxd8P23463 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.7■□□□□ 0.58
Hoxd8P23463 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Gm10418-201ENSMUST00000100943 576 ntBASIC18.7■□□□□ 0.58
Hoxd8P23463 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.7■□□□□ 0.58
Hoxd8P23463 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxd8P23463 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxd8P23463 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Hoxd8P23463 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Gm10819-201ENSMUST00000099988 561 ntBASIC18.7■□□□□ 0.58
Hoxd8P23463 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxd8P23463 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxd8P23463 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Gm12085-201ENSMUST00000119263 940 ntBASIC18.69■□□□□ 0.58
Hoxd8P23463 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Gm27463-201ENSMUST00000183569 57 ntBASIC18.69■□□□□ 0.58
Hoxd8P23463 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxd8P23463 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxd8P23463 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hoxd8P23463 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxd8P23463 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxd8P23463 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Hoxd8P23463 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.68■□□□□ 0.58
Hoxd8P23463 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.68■□□□□ 0.58
Hoxd8P23463 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxd8P23463 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hoxd8P23463 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 Gm25925-201ENSMUST00000158314 306 ntBASIC18.67■□□□□ 0.58
Hoxd8P23463 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.67■□□□□ 0.58
Hoxd8P23463 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxd8P23463 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.67■□□□□ 0.58
Hoxd8P23463 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Hoxd8P23463 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Hoxd8P23463 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms