Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hoxb9P20615 Gm2399-201ENSMUST00000104944 225 ntBASIC17.35■□□□□ 0.37
Hoxb9P20615 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxb9P20615 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxb9P20615 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxb9P20615 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxb9P20615 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Hoxb9P20615 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxb9P20615 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxb9P20615 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hoxb9P20615 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxb9P20615 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.34■□□□□ 0.37
Hoxb9P20615 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.34■□□□□ 0.37
Hoxb9P20615 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hoxb9P20615 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxb9P20615 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb9P20615 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hoxb9P20615 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb9P20615 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxb9P20615 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hoxb9P20615 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxb9P20615 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxb9P20615 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxb9P20615 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Rarb-207ENSMUST00000225921 2756 ntBASIC17.32■□□□□ 0.36
Hoxb9P20615 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Hoxb9P20615 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Gm38285-201ENSMUST00000192928 922 ntBASIC17.32■□□□□ 0.36
Hoxb9P20615 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.32■□□□□ 0.36
Hoxb9P20615 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Hoxb9P20615 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxb9P20615 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxb9P20615 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxb9P20615 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.31■□□□□ 0.36
Hoxb9P20615 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hoxb9P20615 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hoxb9P20615 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Hoxb9P20615 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxb9P20615 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.3■□□□□ 0.36
Hoxb9P20615 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hoxb9P20615 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxb9P20615 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxb9P20615 Gm5408-201ENSMUST00000197998 747 ntBASIC17.29■□□□□ 0.36
Hoxb9P20615 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.29■□□□□ 0.36
Hoxb9P20615 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms