Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcna1P16388 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.5■□□□□ 0.87
Kcna1P16388 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.5■□□□□ 0.87
Kcna1P16388 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kcna1P16388 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcna1P16388 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Kcna1P16388 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Kcna1P16388 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcna1P16388 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Kcna1P16388 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.5■□□□□ 0.87
Kcna1P16388 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kcna1P16388 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Kcna1P16388 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.49■□□□□ 0.87
Kcna1P16388 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kcna1P16388 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.48■□□□□ 0.87
Kcna1P16388 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.48■□□□□ 0.87
Kcna1P16388 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Gm10138-203ENSMUST00000206952 366 ntBASIC20.48■□□□□ 0.87
Kcna1P16388 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Kcna1P16388 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.48■□□□□ 0.87
Kcna1P16388 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.48■□□□□ 0.87
Kcna1P16388 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kcna1P16388 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.47■□□□□ 0.87
Kcna1P16388 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.47■□□□□ 0.87
Kcna1P16388 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kcna1P16388 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.47■□□□□ 0.87
Kcna1P16388 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Kcna1P16388 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Kcna1P16388 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kcna1P16388 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcna1P16388 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.46■□□□□ 0.87
Kcna1P16388 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kcna1P16388 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Kcna1P16388 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.46■□□□□ 0.87
Kcna1P16388 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.46■□□□□ 0.87
Kcna1P16388 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Kcna1P16388 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Kcna1P16388 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kcna1P16388 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Kcna1P16388 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Kcna1P16388 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Kcna1P16388 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kcna1P16388 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Kcna1P16388 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Kcna1P16388 Gm15375-201ENSMUST00000119510 849 ntBASIC20.45■□□□□ 0.86
Kcna1P16388 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kcna1P16388 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.45■□□□□ 0.86
Kcna1P16388 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.45■□□□□ 0.86
Kcna1P16388 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.45■□□□□ 0.86
Kcna1P16388 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.44■□□□□ 0.86
Kcna1P16388 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.44■□□□□ 0.86
Kcna1P16388 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Kcna1P16388 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Kcna1P16388 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Mir2861-201ENSMUST00000175539 82 ntBASIC20.44■□□□□ 0.86
Kcna1P16388 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.44■□□□□ 0.86
Kcna1P16388 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Kcna1P16388 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kcna1P16388 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcna1P16388 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcna1P16388 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Kcna1P16388 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms