Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.93■□□□□ 0.94
Usp53P15975 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp53P15975 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp53P15975 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp53P15975 Gm18025-201ENSMUST00000221733 862 ntBASIC20.92■□□□□ 0.94
Usp53P15975 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp53P15975 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp53P15975 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Usp53P15975 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp53P15975 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp53P15975 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.91■□□□□ 0.94
Usp53P15975 Gm6576-201ENSMUST00000169678 883 ntBASIC20.91■□□□□ 0.94
Usp53P15975 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.91■□□□□ 0.94
Usp53P15975 Mir6982-201ENSMUST00000184354 68 ntBASIC20.91■□□□□ 0.94
Usp53P15975 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp53P15975 Fst-202ENSMUST00000223640 2612 ntBASIC20.91■□□□□ 0.94
Usp53P15975 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp53P15975 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp53P15975 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.9■□□□□ 0.94
Usp53P15975 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp53P15975 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 Mir1199-201ENSMUST00000117015 119 ntBASIC20.9■□□□□ 0.94
Usp53P15975 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp53P15975 Gm43183-201ENSMUST00000200632 547 ntBASIC20.9■□□□□ 0.94
Usp53P15975 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp53P15975 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp53P15975 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Usp53P15975 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.9■□□□□ 0.94
Usp53P15975 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp53P15975 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp53P15975 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Usp53P15975 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp53P15975 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp53P15975 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Usp53P15975 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.89■□□□□ 0.93
Usp53P15975 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.89■□□□□ 0.93
Usp53P15975 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.89■□□□□ 0.93
Usp53P15975 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.89■□□□□ 0.93
Usp53P15975 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp53P15975 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Usp53P15975 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.88■□□□□ 0.93
Usp53P15975 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Usp53P15975 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Usp53P15975 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.88■□□□□ 0.93
Usp53P15975 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp53P15975 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.87■□□□□ 0.93
Usp53P15975 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp53P15975 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Gm715-201ENSMUST00000117865 831 ntBASIC20.87■□□□□ 0.93
Usp53P15975 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.87■□□□□ 0.93
Usp53P15975 Gm37292-201ENSMUST00000192062 758 ntBASIC20.87■□□□□ 0.93
Usp53P15975 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.87■□□□□ 0.93
Usp53P15975 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.87■□□□□ 0.93
Usp53P15975 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp53P15975 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Usp53P15975 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp53P15975 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms